@article{WIT-2013,
  title={Unraveling overlapping deletions by agglomerative clustering},
  author={Wittler, Roland},
  journal={BMC Genomics},
  volume={14},
  number={Suppl 1},
  pages={S12},
  year={2013},
  publisher={BioMed Central Ltd}
}

@INPROCEEDINGS{CHA-MAN-PAT-WIT-2011,
  author = {Chauve, Cedric and Ma\v{n}uch, J\'{a}n and Patterson, Murray and Wittler, Roland},
  title = {Tractability results for the Consecutive-Ones Property with multiplicity},
  booktitle = {Proceedings of CPM 2011},
  volume = {6661},
  pages={90--103},
  year = {2011}
}

@ARTICLE{WIT-MAN-PAT-STO-2011,
  author = {Wittler, Roland and Ma\v{n}uch, J\'{a}n and Patterson, Murray and Stoye, Jens},
  title = {Consistency of Sequence-based Gene Clusters},
  journal = {J. Comp. Biol.},
  year = {2011},
  volume = {18},
  number= {9},
  pages= {1023--1039},
  keywords = {comparative genomics, gene order, gene cluster, gene cluster reconstruction, phylogeny, consistency}
}

@ARTICLE{WIT-CHA-2011,
  author = {Wittler, Roland and Chauve, Cedric},
  booktitle =  {Proceedings of RECOMB Comparative Genomics 2011},
  title = {Consistency-based detection of potential tumor-specific deletions in matched normal/tumor genomes},
  year = {2011},
  journal = {BMC Bioinformatics},
  volume = {12},
  number = {Suppl 9},
  pages = {S21},
  note = {(Proc.\ of RECOMB-CG 2011)}
}



@INPROCEEDINGS{WIT-STO-2010,
  author = {Wittler, Roland and Stoye, Jens},
  title = {Consistency of Sequence-based Gene Clusters},
  booktitle = {Proceedings of RECOMB Comparative Genomics 2010},
  year = {2010},
  volume = {6398},
  series = {LNBI},
  pages = {252--263},
  publisher = {Springer Verlag}
}

@INBOOK{WIT-2010,
  title = {Phylogeny-based Analysis of Gene Clusters},
  publisher = {Faculty of Technology, Bielefeld University},
  year = {2010},
  author = {R. Wittler},
  booktitle = {Ph.D. Thesis},
  url = {http://bieson.ub.uni-bielefeld.de/volltexte/2010/1627/}
}


@ARTICLE{STO-WIT-2009,
  author = {Stoye, Jens and Wittler, Roland},
  title = {A Unified Approach for Reconstructing Ancient Gene Clusters},
  journal = {IEEE/ACM Trans. Comput. Biol. Bioinf.},
  year = {2009},
  volume = {6},
  pages = {387--400},
  number = {3},
  keywords = {comparative genomics, gene order, gene cluster, gene cluster reconstruction, phylogeny, parsimony, consistency},
  pmid = {19644167}
}