Hanna Marie Schilbert
- group: Genetics & Genomics of Plants
- email: h.schilbert{a}uni-bielefeld.de
- office: G0-105
- lab: G0-119
- ORCID: 0000-0003-0474-7753
- Google Scholar: Hanna Marie Schilbert
- twitter: @HSchilbert Follow @HSchilbert
- github: hschilbert
- LinkedIn: Hanna Marie Schilbert
- comparative genomics
- structural variants
- variant impact prediction / variant annotation
- phylogenetic analyses
- identification of economically and nutritional relevant loci
- nutrigenetics/genomics
- flavonoid biosynthesis
- reduction of antinutrients
- analysis of seed quality parameters
- ...
- Arabidopsis thaliana
- Brassica napus
- Mus musculus
- ...
- Python Programming in Genome Research (for Beginners)
- Pucker, B., Reiher, F. and Schilbert, H. M.
Automatic identification of players in the flavonoid biosynthesis with application on the biomedicinal plant Croton tiglium.
Plants 2020, 9, 1103. doi:10.3390/plants9091103.
full text(peer-reviewed) PDF bioRxiv PUB github -
Pellegrinelli V., Rodriguez-Cuenca S., Rouault C., Schilbert H., Virtue S., Moreno-Navarrete J. M.,
Bidault G., del Carmen Vazquez Borrego M., Dias A. R., Pucker B.,
Dale M., Campbell M., Carobbio S., Aron-Wisnewsky J., Mora S., Masiero M., Emmanouilidou A.,
Mukhopadhyay S., Dougan G., den Hoed M., Loos R., Fernandez-Real J. M., Chiarugi D., Clement K. and Vidal-Puig T.
Dysregulation of macrophage PEPD in obesity determines adipose tissue fibro-inflammation and insulin resistance.
doi:10.21203/rs.3.rs-57182.
full text PDF - Schilbert H. M., Rempel A. and Pucker, B. (2020).
Comparison of read mapping and variant calling tools for the analysis of plant NGS data. Plants. doi:10.3390/plants9040439.
full text(peer-reviewed) bioRxiv PDF PUB data -
Pucker B & Schilbert H.
Genomics and Transcriptomics Advance in Plant Sciences.
Molecular Approaches in Plant Biology and Environmental Challenges.
Springer. 2019. ISBN 978-981-15-0690-1. doi:10.1007/978-981-15-0690-1
springer(peer-reviewed book chapter) PUB -
Schilbert, H.M., Pellegrinelli, V., Rodriguez-Cuenca, S., Vidal-Puig, A. & Pucker, B. (2018).
Harnessing natural diversity to identify key amino acid residues in prolidase.
bioRxiv 423475; doi:10.1101/423475
full text PUB -
Pucker, B. Schilbert, H.M., Schumacher, S.F. (2019).
Integrating Molecular Biology and Bioinformatics Education.
Journal of Integrative Bioinformatics. doi:10.1515/jib-2019-0005.
full text(peer-reviewed) PDF PubMed preprint PUB
Applied Genome Research (github) Molecular Methods in Genome Research (github)

Welcome! I am always open for discussing science, learning, and meeting new people.
Current research focus
RNA-Seq analysis
Teaching
Projects for students: Please send me an email if you are interested in a project involving genomics/transcriptomics/bioinformatics/flavonoid biosynthesis/reduction of antinutrients/analysis of seed quality in Brassica napus.