Large Scale Genomics and Big Data Bioinformatics
This research area focuses on genome research on bacteria relevant for biotechnology, agriculture and the environment, on structural and functional decoding of genomes of crop plants, animal cell cultures and microalgae, on metagenomics analysis of microbial communities as well as on elucidation of the function and interaction of genes and genomes with post-genomics and bioinformatics methods.
Speakers: Prof. Dr. J. Kalinowski and Prof. Dr. Jens Stoye
Selection of current projects
- HotSysApp – Sulfolobus acidocaldarius as new archaeal, thermoacidophilic chassis for industrial biotechnology
Responsible: Prof. Dr. J. Kalinowski
Funded by: Federal Ministry of Education and Research (BMBF) - Virus-X – Viral metagenomes for innovation valueViral metagenomes for innovation value
Responsible: Prof. Dr. J. Kalinowski
Funded by: European Commission (EU H2020) - Combiomics 2 – Investigation of mixture effects of pesticides in vitro
Responsible: Prof. Dr. J. Kalinowski
Funded by: Federal Ministry of Education and Research (BMBF) - MyBio – Taylor-made Streptomyces cell factories for the bio-based production of polyketides
Responsible: Prof. Dr. J. Kalinowski
Funded by: Federal Ministry of Education and Research (BMBF) - PW-Exposed – Produced water fractionation and advanced chemical and toxicological characterization using sensitive life stages of marine fish species
Responsible: Prof. Dr. J. Kalinowski
Funded by: Norwegian Research Fund - MoBiDiC – MOBIlization of a DIatom Collection
Responsible: Prof. Dr. T. W. Nattkemper
Funded by: German Research Foundation (DFG) - BIOGAS-GeneMining – Charakterisierung des genetischen und enzymatischen Potentials von Biogas-Mikrobiomen mittels Metaanalyse von Metagenomdatensätzen
Responsible: Prof. Dr. A. Pühler
Funded by: Federal Ministry of Food and Agriculture (BMEL) - de.NBI – German Network for Bioinformatics infrastructure
Responsible: Prof. Dr. A. Pühler
Funded by: Federal Ministry of Education and Research (BMBF) - BMP-III – Biogas-Messprogramm III, Teilvorhaben 2: Systemmikrobiologie
Responsible: Dr. A. Schlüter, Prof. Dr. A. Pühler
Funded by: Federal Ministry of Food and Agriculture (BMEL) - SIMBA – Sustainable innovation of microbiome applications in food systems
Responsible: Dr. A. Sczyrba
Funded by: European Commission (EU H2020) - EOSC-Life: Providing an open collaborative space for digital biology in Europe
Responsible: Dr. A. Sczyrba
Funded by: European Commission (EU H2020) - HiPoAF – Unleashing the hidden potential of the anaerobic fungi
Responsible: Dr. A. Sczyrba
Funded by: German Research Foundation (DFG, DACH) - de.NBI Cloud: Cloud Solutions of the German Network for Bioinformatics Infrastructure (de.NBI) at Bielefeld University
Responsible: Dr. A. Sczyrba, Prof. Dr. Jens Stoye
Funded by: Federal Ministry of Education and Research (BMBF) - de.NBi – German Network of Bioinformatics Infrstructure – BiGi – Bioinformatics Ressource Center for Microbial Genome Research in Biotechnology and Medicine
Responsible: Prof. Dr. J. Stoye
Funded by: Federal Ministry of Education and Research (BMBF) - BeetRes-MaBS – KMU-innovativ-16: Identifizierung von Resistenzgenen für wirtschaftlich relevante Krankheiten der Zuckerrübe durch sequenzierungsbasierte hochauflösende Kartierung
Responsible: Prof. Dr. B. Weisshaar
Funded by: Federal Ministry of Education and Research (BMBF) - RaPEQ – Pflanzenzüchtungsforschung-Verbundvorhaben: Rapssaat als einheimische Quelle von hochwertigem Protein für die menschliche Ernährung
Responsible: Prof. Dr. B. Weisshaar
Funded by: Federal Ministry of Education and Research (BMBF) - MureViU – Multiresistente Vitis-Unterlagen – Entwicklung innovativer, international wettbewerbsfähiger Unterlagen für den Weinbau der nördlichen Anbauregionen
Responsible: Prof. Dr. B. Weisshaar
Funded by: Federal Ministry of Food and Agriculture (BMEL) - SelfieGras – Leistungsstarke Grashybriden für die nachhaltige Biomasseproduktion – Gezielte Nutzung der Selbstfertilität (SelfieGras); Teilvorhaben 2: Gen-Lokalisierung durch Hochdurchsatz-Sequenzierung
Responsible: Prof. Dr. B. Weisshaar
Funded by: Federal Ministry of Food and Agriculture (BMEL) - Evolutionäre Transkriptomik der Blühinduktion
Responsible: Prof. Dr. B. Weisshaar
Funded by: German Research Foundation (DFG) - Neue Anbausysteme für einen nachhaltigen Weinbau
Responsible: Prof. Dr. B. Weisshaar
Funded by: Federal Ministry of Education and Research (BMBF) - CLIB-Kompetenzzentrum Biotechnologie (CKB)
Coordination: Prof. Dr. V.F. Wendisch
Subprojects: Prof. Dr. J. Kalinowski, Prof. Dr. B. Weisshaar
Founded by: EFRE-NRW - IGK 1906 Computational Methods for the Analysis of the Diversity and Dynamics of Genomes
Responsible: Prof. Dr. J. Stoye
Funded by: German Research Foundation (DFG)