Large Scale Genomics and Big Data Bioinformatics
This research area focuses on genome research on bacteria relevant for biotechnology, agriculture and the environment, on structural and functional decoding of genomes of crop plants, animal cell cultures and microalgae, on metagenomics analysis of microbial communities as well as on elucidation of the function and interaction of genes and genomes with post-genomics and bioinformatics methods.
Speakers: Prof. Dr. J. Kalinowski and Prof. Dr. Jens Stoye
Selection of current projects
- BioProtect - Advancing area-based management tools to accelerate the protection and restoration of marine biodiversity across the European sea basins
Responsible: Prof. Dr. T. Nattkemper
Funded by: European Commission - Mini6Ei - Geschlechtserkennung bei sechstägigen Bruteiern mittels zeitaufgelöster Fluoreszenzspektroskopie (Mini6Ei)
Responsible: Prof. Dr. K. Niehaus
Funded by: Federal Office for Agriculture and Food - RaPEQ3 - Teilprojekt B - Rapssaat als einheimische Quelle von hochwertigem Protein für die menschliche Ernährung
Responsible: Prof. Dr. Bernd Weisshaar
Funded by: Federal Ministry of Education and Research (BMBF) - FAIRe Dateninfrastruktur für die Agrosystemforschung
Responsible: Prof. Dr. J. Stoye
Funded by: Deutsche Forschungsgemeinschaft (DFG) - de.NBI-Ressourcenzentrum für mikrobielle Genomforschung in Biotechnologie und Medizin an der Uni Bielefeld – MicroGenUniBi
Responsible: Prof. Dr. J. Stoye & Prof. Dr. R. Heyer
Funded by: Federal Ministry of Education and Research (BMBF) - Horizon 2020 - BLUETOOLS: Innovative tools for sustainable exploration of marine microbiomes: towards a circular blue bioeconomy and healthier marine environments
Responsible: Prof. Dr. A. Sczyrba
Funded by: European Commission (EU H2020) - Into The Deep: Marine Image Analysis Hub for Citizen Scientists
Responsible: Prof. Dr. T. Nattkemper
Funded by: European Commission – Erasmus + Programme - NUM 2.0 - GenSurv: Netzwerk Universitätsmedizin 2.0 - Genomic Pathogen Surveillance and Translational Research
Responsible: Prof. Dr. A. Sczyrba
Funded by: Federal Ministry of Education and Research (BMBF) - Stabilität und Vererbbarkeit von DNA-Methylierungsmustern in Zuckerrübe: Einfluss auf phänotypische Plastizität, TE-Aktivitäten und Potential für die Züchtung
Funded by: Federal Ministry of Education and Research (BMBF)
Resonsible: Prof. Dr. Bernd Weisshaar - NFDI4Microbiota - Nationale Forschungsdateninfrastruktur für Mikrobiota-Forschung
Responsible: Prof. Dr. J. Stoye
Funded by: Deutsche Forschungsgemeinschaft (DFG) - DataPLANT – Daten in Pflanzen-Grundlagenforschung
Responsible: Prof. Dr. A. Bräutigam
Funded by: Deutsche Forschungsgemeinschaft (DFG) - DeepSeaQuence - Uncovering the metabolic repertoire and capacity of Arctic deep-sea hydrothermal vent
Responsible: Prof. Dr. J. Kalinowski
Funded by: The Research Council of Norway - Plasmidome – Machine Learning methods for data-driven discovery of antibiotic resistance plasmid dissemination and evolution
Responsible: Prof. Dr. A. Sczyrba
Funded by: Novo Nordisk Foundation - NFDI4BioDiversity - A Consortium for the National Research Data Infrastructure
Responsible: Prof. Dr. J. Stoye
Funded by: Deutsche Forschungsgemeinschaft (DFG) - PANGAIA – Pan-genome Graph Algorithms and Data Integration
Responsible: Prof. Dr. A. Schönhuth (coordinator), Prof. Dr. J. Stoye
Funded by: European Commission (EU H2020, RISE)
X/Twitter: @PangaiaProject