Large Scale Genomics and Big Data Bioinformatics
This research area focuses on genome research on bacteria relevant for biotechnology, agriculture and the environment, on structural and functional decoding of genomes of crop plants, animal cell cultures and microalgae, on metagenomics analysis of microbial communities as well as on elucidation of the function and interaction of genes and genomes with post-genomics and bioinformatics methods.
Speakers: Prof. Dr. J. Kalinowski and Prof. Dr. A. Sczyrba
Selection of current projects
- 2022-ECP2 ELIXIR Hybrid Cloud und 2022-Travel Funds for cross-Node activities
Responsible: Prof. Dr. A. Sczyrba
Funded by: ELIXIR - BioProtect - Advancing area-based management tools to accelerate the protection and restoration of marine biodiversity across the European sea basins
Responsible: Prof. Dr. T. Nattkemper
Funded by: European Commission - BLUETOOLS: Innovative tools for sustainable exploration of marine microbiomes: towards a circular blue bioeconomy and healthier marine environments
Responsible: Prof. Dr. A. Sczyrba
Funded by: European Commission (EU H2020) - Comparative analysis of deleterious genetic variation in wild animal populations
Responsible: Prof. Dr. J. Hoffman
Funded by: Deutsche Forschungsgemeinschaft (DFG) - EOSC-ENTRUST: A European Network of TRUSTed research environments
Responsible: Prof. Dr. A. Sczyrba
Funded by: European Commission (EU) - EOSC-Life (Charite): Providing an open collaborative space for digital biology in Europe
Responsible: Prof. Dr. A. Sczyrba
Funded by: European Commission (EU) - Erhöhung der Protein-Nutzungseffizienz bei Backweizen durch innovative Züchtungsforschung an der MAGIC-WHEAT-Population WM-800 für effektiven Klimaschutz in der Getreidewertschöpfungskette (MAGIC-KlimaBack)
Responsible: Prof. Dr. R. Schmidt-Schippers
Funded by: Federal Ministry of Food and Agriculture (BMEL) - MicroGenUniBi: de.NBI-Ressourcenzentrum für mikrobielle Genomforschung in Biotechnologie und Medizin an der Uni Bielefeld
Responsible: Prof. Dr. J. Stoye & Prof. Dr. R. Heyer
Funded by: Federal Ministry of Education and Research (BMBF) - Modulation hypoxischer Antworten durch RADICAL-INDUCED CELL DEATH 1 in Arabidopsis thaliana
Responsible: Prof. Dr. R. Schmidt-Schippers
Funded by: Deutsche Forschungsgemeinschaft (DFG) - NUM 2.0 - GenSurv: Netzwerk Universitätsmedizin 2.0 - Genomic Pathogen Surveillance and Translational Research
Responsible: Prof. Dr. A. Sczyrba
Funded by: Federal Ministry of Education and Research (BMBF) - NFDI DataPLANT – Daten in Pflanzen-Grundlagenforschung
Responsible: Prof. Dr. A. Bräutigam
Funded by: Deutsche Forschungsgemeinschaft (DFG) - NFDI4BioDiversity - A Consortium for the National Research Data Infrastructure
Responsible: Prof. Dr. J. Stoye
Funded by: Deutsche Forschungsgemeinschaft (DFG) - NFDI4Microbiota - Nationale Forschungsdateninfrastruktur für Mikrobiota-Forschung
Responsible: Prof. Dr. J. Stoye
Funded by: Deutsche Forschungsgemeinschaft (DFG) - PANGAIA – Pan-genome Graph Algorithms and Data Integration
Responsible: Prof. Dr. A. Schönhuth (coordinator), Prof. Dr. J. Stoye
Funded by: European Commission (EU H2020, RISE) - Plasmidome – Machine Learning methods for data-driven discovery of antibiotic resistance plasmid dissemination and evolution
Responsible: Prof. Dr. A. Sczyrba
Funded by: Novo Nordisk Foundation - RaPEQ3 - Rapssaat als einheimische Quelle von hochwertigen Protein für die menschliche Ernährung
Funded by: Federal Ministry of Education and Research (BMBF)
Resonsible: Prof. Dr. Bernd Weisshaar - Stabilität und Vererbbarkeit von DNA-Methylierungsmustern in Zuckerrübe: Einfluss auf phänotypische Plastizität, TE-Aktivitäten und Potential für die Züchtung
Funded by: Federal Ministry of Education and Research (BMBF)
Resonsible: Prof. Dr. Bernd Weisshaar